Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.25■□□□□ 0.03
ITCHQ96J02 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
ITCHQ96J02 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
ITCHQ96J02 AC025580.3-201ENST00000617932 1424 ntBASIC15.25■□□□□ 0.03
ITCHQ96J02 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ITCHQ96J02 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ITCHQ96J02 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ITCHQ96J02 AC099063.4-201ENST00000641099 1602 ntBASIC15.25■□□□□ 0.03
ITCHQ96J02 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 PCDHA3-202ENST00000532566 4594 ntBASIC15.24■□□□□ 0.03
ITCHQ96J02 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 AC090616.6-203ENST00000579186 1945 ntBASIC15.24■□□□□ 0.03
ITCHQ96J02 AC138035.3-201ENST00000622706 2791 ntBASIC15.24■□□□□ 0.03
ITCHQ96J02 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.24■□□□□ 0.03
ITCHQ96J02 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 AP001005.1-201ENST00000571755 1248 ntBASIC15.24■□□□□ 0.03
ITCHQ96J02 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 AC004877.2-201ENST00000623941 599 ntBASIC15.24■□□□□ 0.03
ITCHQ96J02 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ITCHQ96J02 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.24■□□□□ 0.03
ITCHQ96J02 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ITCHQ96J02 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ITCHQ96J02 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ITCHQ96J02 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
ITCHQ96J02 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ITCHQ96J02 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ITCHQ96J02 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.23■□□□□ 0.03
ITCHQ96J02 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.23■□□□□ 0.03
ITCHQ96J02 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 AC104692.2-201ENST00000603054 253 ntBASIC15.23■□□□□ 0.03
ITCHQ96J02 Z83851.2-201ENST00000609564 659 ntBASIC15.23■□□□□ 0.03
ITCHQ96J02 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms