Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 UXT-AS1-201ENST00000590504 1525 ntBASIC16.5■□□□□ 0.23
IFT43Q96FT9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 AC005498.2-205ENST00000593218 784 ntBASIC16.5■□□□□ 0.23
IFT43Q96FT9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 SPTSSB-204ENST00000617024 1292 ntBASIC16.5■□□□□ 0.23
IFT43Q96FT9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IFT43Q96FT9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT43Q96FT9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 TUBB3P1-201ENST00000405796 1332 ntBASIC16.49■□□□□ 0.23
IFT43Q96FT9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 RBPMS2P1-201ENST00000437762 623 ntBASIC16.49■□□□□ 0.23
IFT43Q96FT9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 AC098859.1-201ENST00000502915 1238 ntBASIC16.49■□□□□ 0.23
IFT43Q96FT9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms