Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 MIR4751-201ENST00000578027 74 ntBASIC15.21■□□□□ 0.03
LRRC58Q96CX6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.21■□□□□ 0.03
LRRC58Q96CX6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC58Q96CX6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC58Q96CX6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PMS2P7-201ENST00000506558 1336 ntBASIC15.2■□□□□ 0.02
LRRC58Q96CX6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 AC018712.1-201ENST00000455767 687 ntBASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 AC117500.6-201ENST00000624871 588 ntBASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRC58Q96CX6 AC127383.1-201ENST00000444697 1800 ntBASIC15.2■□□□□ 0.02
LRRC58Q96CX6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 RPS2P28-201ENST00000314255 741 ntBASIC15.19■□□□□ 0.02
LRRC58Q96CX6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 AC026396.1-201ENST00000419388 421 ntBASIC15.19■□□□□ 0.02
LRRC58Q96CX6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC58Q96CX6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms