Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 Z97205.2-201ENST00000564697 1639 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 TNRC18P3-201ENST00000441896 2691 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 SPTLC1P1-201ENST00000447199 261 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 AL589987.1-201ENST00000453380 819 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 TERF1P3-201ENST00000505638 1227 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 AC138761.1-201ENST00000584393 385 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LINC01115-203ENST00000606068 577 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LINC02084-201ENST00000606069 1096 ntBASIC15.8■□□□□ 0.12
SCAMP4Q969E2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAMP4Q969E2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.79■□□□□ 0.12
SCAMP4Q969E2 AC097359.3-201ENST00000603982 1210 ntBASIC15.79■□□□□ 0.12
SCAMP4Q969E2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 AL607033.1-201ENST00000623900 1599 ntBASIC15.79■□□□□ 0.12
SCAMP4Q969E2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAMP4Q969E2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms