Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 AC024267.1-201ENST00000582320 895 ntBASIC15.1■□□□□ 0.01
TM9SF4Q92544 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 RN7SL828P-201ENST00000607615 303 ntBASIC15.1■□□□□ 0.01
TM9SF4Q92544 TEX28P1-201ENST00000613479 1221 ntBASIC15.1■□□□□ 0.01
TM9SF4Q92544 TEX28P2-201ENST00000617764 1221 ntBASIC15.1■□□□□ 0.01
TM9SF4Q92544 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF4Q92544 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF4Q92544 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 KRT8P39-201ENST00000396270 1433 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AC126177.1-201ENST00000547829 2218 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 SPTLC1P1-201ENST00000447199 261 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 SERBP1P3-201ENST00000459980 809 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 HLA-J-202ENST00000469281 1241 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AL596325.1-201ENST00000563991 1082 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AC105021.1-202ENST00000570572 669 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 AC026979.3-201ENST00000607315 403 ntBASIC15.09■□□□□ 0.01
TM9SF4Q92544 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF4Q92544 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF4Q92544 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TM9SF4Q92544 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TM9SF4Q92544 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TM9SF4Q92544 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TM9SF4Q92544 AC010491.1-201ENST00000563101 2797 ntBASIC15.08■□□□□ 0.01
TM9SF4Q92544 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TM9SF4Q92544 AL603832.2-201ENST00000566195 2125 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms