Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 YBX2P1-201ENST00000394192 760 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC142381.1-201ENST00000426099 345 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 GPX1P2-201ENST00000429271 606 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC243562.1-201ENST00000560672 389 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC027307.2-201ENST00000591252 911 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 C20orf181-201ENST00000623918 480 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AP005117.1-202ENST00000581724 1908 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 AC023824.1-201ENST00000562945 2975 ntBASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF439Q8NDP4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
ZNF439Q8NDP4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 MKNK2P1-201ENST00000437526 628 ntBASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AC026120.1-201ENST00000611536 926 ntBASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 SPTSSB-204ENST00000617024 1292 ntBASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms