Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC100757.4-201ENST00000626934 759 ntBASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC005622.1-201ENST00000636801 1703 ntBASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC024681.1-201ENST00000521917 487 ntBASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AC025181.2-201ENST00000606994 802 ntBASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC168Q8NDH2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AC012313.1-201ENST00000593393 3059 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AC004987.2-201ENST00000395959 1148 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 Z97180.1-201ENST00000445173 988 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 SLED1-202ENST00000512051 380 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 RN7SL774P-201ENST00000577467 290 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL133373.2-201ENST00000623187 2828 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 NPM1P43-201ENST00000558669 786 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL133499.1-201ENST00000596207 608 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AC107373.2-201ENST00000607735 490 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 BICD1-207ENST00000551848 1962 ntBASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC168Q8NDH2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC008132.1-202ENST00000342005 1389 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC016396.2-201ENST00000562575 1417 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms