Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 AC005622.1-201ENST00000636801 1703 ntBASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 CXCL1P1-201ENST00000502804 216 ntBASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIML2Q8N7C3 AC106881.1-201ENST00000605849 3329 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RNU1-129P-201ENST00000384064 167 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AL031432.2-201ENST00000566714 459 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AL928711.1-201ENST00000570165 459 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 MIR4751-201ENST00000578027 74 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 U1.21-201ENST00000580816 167 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AL031055.1-201ENST00000606362 631 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ACTL9-202ENST00000612068 1252 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AC087386.2-201ENST00000623212 4637 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 AC005089.1-201ENST00000619486 2241 ntBASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIML2Q8N7C3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIML2Q8N7C3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms