Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 KRT223P-202ENST00000449164 1292 ntBASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 KRT8P37-201ENST00000451609 1420 ntBASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 AL592424.1-201ENST00000563624 1536 ntBASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL3Q8N5Y2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AL162726.2-201ENST00000438986 1017 ntBASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MIR4259-201ENST00000584466 101 ntBASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 LINC01115-203ENST00000606068 577 ntBASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 AL158212.4-201ENST00000624062 1286 ntBASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MTHFR-217ENST00000641820 1569 ntBASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.12■□□□□ 0.49
MSL3Q8N5Y2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 USP32P1-208ENST00000506594 1164 ntBASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 AC233724.13-201ENST00000598383 410 ntBASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 MIR6775-201ENST00000617557 69 ntBASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.11■□□□□ 0.49
MSL3Q8N5Y2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms