Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AL365203.3-201ENST00000609742 2057 ntBASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 GK-202ENST00000378941 458 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 HLA-H-201ENST00000383620 1096 ntBASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 MTND6P24-201ENST00000440466 518 ntBASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AC004233.3-201ENST00000607794 1269 ntBASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AC009118.2-201ENST00000613275 655 ntBASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC33Q8N5R6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 AL589702.1-201ENST00000641229 1509 ntBASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 AL662799.1-202ENST00000614205 422 ntBASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC33Q8N5R6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 LINC00554-201ENST00000564841 3011 ntBASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC33Q8N5R6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms