Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 AL022342.1-201ENST00000400363 863 ntBASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 KRT18P58-201ENST00000527480 1120 ntBASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC83Q8IWF9 UXT-AS1-201ENST00000590504 1525 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 NFIC-211ENST00000641145 8399 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 AC069335.1-201ENST00000489972 472 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 IGHV3-62-201ENST00000520057 340 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 SLC25A39P2-201ENST00000537614 270 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 C20orf181-201ENST00000623918 480 ntBASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC83Q8IWF9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 AC068418.2-201ENST00000577309 3703 ntBASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 CYP4F24P-201ENST00000586049 1580 ntBASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 HLA-H-201ENST00000383620 1096 ntBASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC83Q8IWF9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms