Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AC103810.3-201ENST00000583567 96 ntBASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AC244093.1-201ENST00000610837 814 ntBASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AC009542.2-202ENST00000619004 1067 ntBASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS4Q8IUM7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 CNN2P8-201ENST00000421872 913 ntBASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 RPL13AP20-201ENST00000459725 609 ntBASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 AP001582.1-201ENST00000525856 295 ntBASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 RN7SL560P-201ENST00000577943 264 ntBASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 AC022211.2-201ENST00000585075 2527 ntBASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS4Q8IUM7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC245100.3-201ENST00000441281 285 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC099548.2-209ENST00000480264 625 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC023310.1-201ENST00000554836 735 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC025279.2-201ENST00000569730 653 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms