Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 REXO1L1P-202ENST00000608646 1974 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AC023024.2-201ENST00000623561 1993 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AL450487.1-201ENST00000426799 995 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AC245100.5-201ENST00000452108 331 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 SLC25A1P1-201ENST00000528351 927 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AC061975.2-201ENST00000581722 295 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 CICP4-201ENST00000447359 2812 ntBASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKAP1Q86WV1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SKAP1Q86WV1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
SKAP1Q86WV1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AC004870.1-201ENST00000315132 882 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 WASH6P-202ENST00000359512 1437 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 KRT8P44-201ENST00000441609 1350 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AP001282.1-201ENST00000531301 1499 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AL691432.1-201ENST00000596308 1422 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AC007191.1-201ENST00000623179 2995 ntBASIC19.89■□□□□ 0.77
SKAP1Q86WV1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKAP1Q86WV1 AC005912.2-201ENST00000619492 2400 ntBASIC19.88■□□□□ 0.77
SKAP1Q86WV1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 AL365330.1-201ENST00000607459 531 ntBASIC19.88■□□□□ 0.77
SKAP1Q86WV1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 AJ011931.1-201ENST00000618749 2492 ntBASIC19.88■□□□□ 0.77
SKAP1Q86WV1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKAP1Q86WV1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms