Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 GPS2P2-201ENST00000430745 888 ntBASIC14.16□□□□□ -0.14
RTTNQ86VV8 ATP5G2P4-201ENST00000442175 420 ntBASIC14.16□□□□□ -0.14
RTTNQ86VV8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 FAM86C2P-203ENST00000528684 1004 ntBASIC14.16□□□□□ -0.14
RTTNQ86VV8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 LINC01144-201ENST00000626198 1710 ntBASIC14.16□□□□□ -0.14
RTTNQ86VV8 AC092850.2-201ENST00000623821 2697 ntBASIC14.16□□□□□ -0.14
RTTNQ86VV8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
RTTNQ86VV8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTTNQ86VV8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 AC092127.1-201ENST00000567093 3455 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TERF1P3-201ENST00000505638 1227 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 AC009093.7-201ENST00000623853 1223 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 AL596087.1-201ENST00000400979 1969 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 AC142381.1-201ENST00000426099 345 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 DUX4L27-201ENST00000554796 1261 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.15□□□□□ -0.14
RTTNQ86VV8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTTNQ86VV8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms