Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 AL121894.2-201ENST00000602977 491 ntBASIC16.17■□□□□ 0.18
PACS2Q86VP3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACS2Q86VP3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.17■□□□□ 0.18
PACS2Q86VP3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 AC087481.3-201ENST00000602886 1894 ntBASIC16.16■□□□□ 0.18
PACS2Q86VP3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 RBM17P3-201ENST00000417687 1192 ntBASIC16.16■□□□□ 0.18
PACS2Q86VP3 KATNBL1P2-201ENST00000433311 835 ntBASIC16.16■□□□□ 0.18
PACS2Q86VP3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACS2Q86VP3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
PACS2Q86VP3 AC148477.4-201ENST00000613430 1793 ntBASIC16.15■□□□□ 0.18
PACS2Q86VP3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACS2Q86VP3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 AL603841.1-201ENST00000430516 664 ntBASIC16.15■□□□□ 0.18
PACS2Q86VP3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.15■□□□□ 0.18
PACS2Q86VP3 ABCD1P5-201ENST00000445663 754 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms