Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 AC106820.3-201ENST00000561653 397 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 AC013355.1-201ENST00000562625 723 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 RN7SL574P-201ENST00000581512 297 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
DENND4AQ7Z401 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AC015818.8-201ENST00000587907 1519 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AC148477.4-201ENST00000613430 1793 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 IMP3P2-201ENST00000489760 475 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 RNA5SP486-201ENST00000515961 83 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AC022217.1-201ENST00000521069 738 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 AC132938.4-201ENST00000623835 848 ntBASIC16.07■□□□□ 0.16
DENND4AQ7Z401 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4AQ7Z401 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.06■□□□□ 0.16
DENND4AQ7Z401 AC007274.2-201ENST00000421675 662 ntBASIC16.06■□□□□ 0.16
DENND4AQ7Z401 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 RN7SL713P-201ENST00000582127 302 ntBASIC16.06■□□□□ 0.16
DENND4AQ7Z401 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
DENND4AQ7Z401 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 MIR648-201ENST00000385046 94 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms