Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 AC079112.1-201ENST00000454972 939 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AP000593.2-201ENST00000542775 1433 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 VDAC1P1-201ENST00000439229 848 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC004066.1-201ENST00000502488 802 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 RN7SL163P-201ENST00000583100 276 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AC005632.3-201ENST00000605544 308 ntBASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD4Q7Z3J3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 MIR6842-201ENST00000612539 65 ntBASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 AC020916.1-201ENST00000587762 1774 ntBASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD4Q7Z3J3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD4Q7Z3J3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD4Q7Z3J3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 SNORD3B-2-202ENST00000571722 791 ntBASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RGPD4Q7Z3J3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms