Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AF228730.7-201ENST00000641842 219 ntBASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AP003680.1-201ENST00000598970 3660 ntBASIC14.02□□□□□ -0.17
C11orf88Q6PI97 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.02□□□□□ -0.17
C11orf88Q6PI97 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AC139749.1-202ENST00000617529 3139 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 KLF4P1-201ENST00000412782 1185 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AC106730.1-201ENST00000566722 1090 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AC006538.3-201ENST00000612495 578 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 AD001527.2-201ENST00000622994 785 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 FAM215A-202ENST00000632077 792 ntBASIC14.01□□□□□ -0.17
C11orf88Q6PI97 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C11orf88Q6PI97 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 AL031595.1-201ENST00000623969 4709 ntBASIC14□□□□□ -0.17
C11orf88Q6PI97 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14□□□□□ -0.17
C11orf88Q6PI97 AL353593.2-201ENST00000602529 1483 ntBASIC14□□□□□ -0.17
C11orf88Q6PI97 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
C11orf88Q6PI97 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf88Q6PI97 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms