Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 MIR661-201ENST00000384842 89 ntBASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 MRPS18AP1-201ENST00000414458 589 ntBASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RFWD3Q6PCD5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 FER1L4-210ENST00000615531 5998 ntBASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 TSPY16P-201ENST00000449843 468 ntBASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 MIR3197-201ENST00000582241 73 ntBASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 LINC02084-201ENST00000606069 1096 ntBASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 CYP4F24P-201ENST00000586049 1580 ntBASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFWD3Q6PCD5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms