Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AL591424.1-201ENST00000442569 1213 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 KRT18P3-201ENST00000451602 1288 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 SLC25A1P1-201ENST00000528351 927 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AL121894.2-201ENST00000602977 491 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AC140113.2-201ENST00000604370 208 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AC027601.4-201ENST00000611259 610 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 AC011477.6-201ENST00000604980 1927 ntBASIC16.33■□□□□ 0.2
CASC4Q6P4E1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CASC4Q6P4E1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AP001282.1-201ENST00000531301 1499 ntBASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 RARRES2P8-201ENST00000566335 367 ntBASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AL138918.1-201ENST00000568306 659 ntBASIC16.32■□□□□ 0.2
CASC4Q6P4E1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.32■□□□□ 0.2
CASC4Q6P4E1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AC013268.4-201ENST00000637413 2228 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms