Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H2BCQ6DN03 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 BNIP3P1-202ENST00000550043 1585 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AL354751.1-201ENST00000412768 1863 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AC104073.2-201ENST00000453737 312 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AC021723.1-201ENST00000486306 515 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 DNM1P51-201ENST00000558149 522 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 AL805961.1-203ENST00000641078 1258 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 LETM1P2-201ENST00000597330 2178 ntBASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H2BCQ6DN03 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 LINC02012-201ENST00000608206 1725 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 DPM3-202ENST00000368399 517 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 PDIA3P2-201ENST00000428073 158 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 AC012362.1-201ENST00000434906 739 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 EEF1DP4-201ENST00000446006 880 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 AC022748.3-201ENST00000621828 275 ntBASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H2BCQ6DN03 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms