Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 USP32P1-208ENST00000506594 1164 ntBASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 KRT8P22-201ENST00000562317 1415 ntBASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 PCDH8P1-201ENST00000428983 2773 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AC015936.2-201ENST00000593177 259 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 BTNL10-201ENST00000595971 695 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AC133539.2-201ENST00000604757 467 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 BNIP3P41-202ENST00000616656 861 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 MIR6775-201ENST00000617557 69 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 CU634019.7-201ENST00000624153 1185 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 FP236241.2-201ENST00000624906 1185 ntBASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.28□□□□□ -0.12
RNFT1Q5M7Z0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
RNFT1Q5M7Z0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms