Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 AC104640.1-201ENST00000562617 2109 ntBASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 RPL37AP1-201ENST00000412502 279 ntBASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 AC136604.1-201ENST00000418535 575 ntBASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 AL589739.1-201ENST00000607720 493 ntBASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBWD3Q5JTY5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 AC004449.1-201ENST00000564240 433 ntBASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 SPDYE12P-201ENST00000618416 771 ntBASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 AC022532.1-201ENST00000624563 1728 ntBASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 TUBB3P1-201ENST00000405796 1332 ntBASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBWD3Q5JTY5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms