Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC091076.1-201ENST00000610741 619 ntBASIC14.35□□□□□ -0.11
CCDC58Q4VC31 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 AC107918.4-202ENST00000641623 219 ntBASIC14.35□□□□□ -0.11
CCDC58Q4VC31 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 COL6A4P2-202ENST00000504443 2753 ntBASIC14.35□□□□□ -0.11
CCDC58Q4VC31 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 PTENP1-202ENST00000532280 3996 ntBASIC14.35□□□□□ -0.11
CCDC58Q4VC31 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC58Q4VC31 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AC087481.3-201ENST00000602886 1894 ntBASIC14.34□□□□□ -0.11
CCDC58Q4VC31 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.34□□□□□ -0.11
CCDC58Q4VC31 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AC025062.2-201ENST00000605477 670 ntBASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AC008667.4-201ENST00000607370 168 ntBASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC58Q4VC31 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC58Q4VC31 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC58Q4VC31 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms