Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 AC022210.1-201ENST00000449856 793 ntBASIC18.92■□□□□ 0.62
PDS5AQ29RF7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 AP001063.1-201ENST00000568332 529 ntBASIC18.92■□□□□ 0.62
PDS5AQ29RF7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 AL008721.1-201ENST00000609964 604 ntBASIC18.92■□□□□ 0.62
PDS5AQ29RF7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 AL662844.4-201ENST00000606367 2838 ntBASIC18.91■□□□□ 0.62
PDS5AQ29RF7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 MIR1909-201ENST00000411312 80 ntBASIC18.91■□□□□ 0.62
PDS5AQ29RF7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 AC119751.2-201ENST00000504529 210 ntBASIC18.91■□□□□ 0.62
PDS5AQ29RF7 AC068587.3-201ENST00000526613 355 ntBASIC18.91■□□□□ 0.62
PDS5AQ29RF7 SLC25A47P1-201ENST00000531577 414 ntBASIC18.91■□□□□ 0.62
PDS5AQ29RF7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDS5AQ29RF7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 ACKR1-201ENST00000368121 1240 ntBASIC18.9■□□□□ 0.62
PDS5AQ29RF7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 KRT43P-201ENST00000434019 910 ntBASIC18.9■□□□□ 0.62
PDS5AQ29RF7 TDH-203ENST00000531764 1110 ntBASIC18.9■□□□□ 0.62
PDS5AQ29RF7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 PTP4A1P2-201ENST00000546033 454 ntBASIC18.9■□□□□ 0.62
PDS5AQ29RF7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 AC018665.1-201ENST00000622927 1362 ntBASIC18.9■□□□□ 0.62
PDS5AQ29RF7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDS5AQ29RF7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AC024909.3-201ENST00000611513 2257 ntBASIC18.89■□□□□ 0.61
PDS5AQ29RF7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms