Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 HMGA1P7-201ENST00000406908 502 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 UNC93B6-202ENST00000528242 690 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 AC116407.3-201ENST00000623905 1129 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 CDC14C-201ENST00000428251 1719 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 AL137784.3-201ENST00000623858 2288 ntBASIC12.3□□□□□ -0.44
HIST1H1AQ02539 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H1AQ02539 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AC026748.1-201ENST00000624349 3251 ntBASIC12.29□□□□□ -0.44
HIST1H1AQ02539 PRAL-201ENST00000624952 3286 ntBASIC12.29□□□□□ -0.44
HIST1H1AQ02539 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 LINC02447-202ENST00000501888 2146 ntBASIC12.29□□□□□ -0.44
HIST1H1AQ02539 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AP003680.1-201ENST00000598970 3660 ntBASIC12.29□□□□□ -0.44
HIST1H1AQ02539 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.29□□□□□ -0.44
HIST1H1AQ02539 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H1AQ02539 AC112504.1-201ENST00000623415 1841 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms