Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.36□□□□□ -0.11
VBP1P61758 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VBP1P61758 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
VBP1P61758 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.35□□□□□ -0.11
VBP1P61758 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.35□□□□□ -0.11
VBP1P61758 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.35□□□□□ -0.11
VBP1P61758 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.35□□□□□ -0.11
VBP1P61758 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 REXO1L3P-201ENST00000622202 1288 ntBASIC14.35□□□□□ -0.11
VBP1P61758 AC011558.1-201ENST00000623459 338 ntBASIC14.35□□□□□ -0.11
VBP1P61758 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.35□□□□□ -0.11
VBP1P61758 BEND3P1-201ENST00000421591 1944 ntBASIC14.35□□□□□ -0.11
VBP1P61758 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
VBP1P61758 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VBP1P61758 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.34□□□□□ -0.11
VBP1P61758 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 MMP23A-201ENST00000234610 1017 ntBASIC14.34□□□□□ -0.11
VBP1P61758 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms