Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 AC138969.2-201ENST00000532739 9932 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.07□□□□□ -0.32
SPCS3P61009 FAM185BP-201ENST00000443595 716 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 AC245100.5-201ENST00000452108 331 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.07□□□□□ -0.32
SPCS3P61009 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 AC023157.3-201ENST00000619086 2088 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 SSR4P1-203ENST00000599569 2260 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 REXO1L2P-201ENST00000425429 2069 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.06□□□□□ -0.32
SPCS3P61009 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 RPS2P1-201ENST00000434010 821 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.06□□□□□ -0.32
SPCS3P61009 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.06□□□□□ -0.32
SPCS3P61009 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.06□□□□□ -0.32
SPCS3P61009 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 AC073648.2-201ENST00000510116 352 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 KRT18P35-201ENST00000510488 1269 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.06□□□□□ -0.32
SPCS3P61009 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 PRELID1P1-202ENST00000567272 903 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 AL365330.1-201ENST00000607459 531 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 AC005593.1-201ENST00000624894 515 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 AL645728.2-201ENST00000641974 660 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 AC009090.5-201ENST00000624886 2285 ntBASIC13.06□□□□□ -0.32
SPCS3P61009 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS3P61009 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS3P61009 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS3P61009 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms