Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.94■□□□□ 0.3
MCCD1P59942 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MCCD1P59942 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
MCCD1P59942 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.94■□□□□ 0.3
MCCD1P59942 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 AC132872.4-202ENST00000622924 2756 ntBASIC16.94■□□□□ 0.3
MCCD1P59942 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MCCD1P59942 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MCCD1P59942 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
MCCD1P59942 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MCCD1P59942 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.93■□□□□ 0.3
MCCD1P59942 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.93■□□□□ 0.3
MCCD1P59942 GHSR-202ENST00000427970 912 ntBASIC16.93■□□□□ 0.3
MCCD1P59942 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.93■□□□□ 0.3
MCCD1P59942 KRT18P43-201ENST00000469825 1281 ntBASIC16.93■□□□□ 0.3
MCCD1P59942 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.93■□□□□ 0.3
MCCD1P59942 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 AC006058.4-201ENST00000624016 1670 ntBASIC16.93■□□□□ 0.3
MCCD1P59942 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MCCD1P59942 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 MROH4P-201ENST00000431302 1578 ntBASIC16.93■□□□□ 0.3
MCCD1P59942 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MCCD1P59942 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MCCD1P59942 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.93■□□□□ 0.3
MCCD1P59942 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MCCD1P59942 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 AC073347.1-201ENST00000421633 2643 ntBASIC16.92■□□□□ 0.3
MCCD1P59942 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MCCD1P59942 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MCCD1P59942 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.92■□□□□ 0.3
MCCD1P59942 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.92■□□□□ 0.3
MCCD1P59942 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 AC244517.3-201ENST00000616254 1235 ntBASIC16.92■□□□□ 0.3
MCCD1P59942 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
MCCD1P59942 AC023157.3-201ENST00000619086 2088 ntBASIC16.92■□□□□ 0.3
MCCD1P59942 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MCCD1P59942 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
MCCD1P59942 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.91■□□□□ 0.3
MCCD1P59942 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MCCD1P59942 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MCCD1P59942 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MCCD1P59942 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MCCD1P59942 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms