Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
PTPN5P54829 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PTPN5P54829 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PTPN5P54829 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN5P54829 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN5P54829 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 PCDHA14-201ENST00000506751 2298 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN5P54829 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 UBALD1-205ENST00000590891 2641 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 AL162726.2-201ENST00000438986 1017 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN5P54829 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 AC079316.1-201ENST00000548397 411 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 RN7SL560P-201ENST00000577943 264 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 MIR4706-201ENST00000582134 82 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 RPSAP52-203ENST00000622976 1023 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN5P54829 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.45■□□□□ 0.22
PTPN5P54829 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN5P54829 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN5P54829 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN5P54829 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PTPN5P54829 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTPN5P54829 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTPN5P54829 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN5P54829 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN5P54829 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTPN5P54829 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN5P54829 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN5P54829 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN5P54829 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTPN5P54829 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.44■□□□□ 0.22
PTPN5P54829 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.44■□□□□ 0.22
PTPN5P54829 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.44■□□□□ 0.22
PTPN5P54829 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN5P54829 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 UPF3AP2-201ENST00000457924 1132 ntBASIC16.44■□□□□ 0.22
PTPN5P54829 RPL13AP20-201ENST00000459725 609 ntBASIC16.44■□□□□ 0.22
PTPN5P54829 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN5P54829 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms