Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 KRT17P4-201ENST00000429445 819 ntBASIC17.6■□□□□ 0.41
LBX1P52954 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.6■□□□□ 0.41
LBX1P52954 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LBX1P52954 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.6■□□□□ 0.41
LBX1P52954 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.6■□□□□ 0.41
LBX1P52954 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.6■□□□□ 0.41
LBX1P52954 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.6■□□□□ 0.41
LBX1P52954 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LBX1P52954 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LBX1P52954 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.59■□□□□ 0.41
LBX1P52954 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.59■□□□□ 0.41
LBX1P52954 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.59■□□□□ 0.41
LBX1P52954 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LBX1P52954 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.59■□□□□ 0.41
LBX1P52954 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.59■□□□□ 0.41
LBX1P52954 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.59■□□□□ 0.41
LBX1P52954 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 RN7SL258P-201ENST00000478664 300 ntBASIC17.59■□□□□ 0.41
LBX1P52954 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.59■□□□□ 0.41
LBX1P52954 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 AL162426.1-201ENST00000624141 743 ntBASIC17.59■□□□□ 0.41
LBX1P52954 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.59■□□□□ 0.41
LBX1P52954 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LBX1P52954 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LBX1P52954 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.58■□□□□ 0.41
LBX1P52954 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.58■□□□□ 0.41
LBX1P52954 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LBX1P52954 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
LBX1P52954 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LBX1P52954 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
LBX1P52954 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
LBX1P52954 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LBX1P52954 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LBX1P52954 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.58■□□□□ 0.4
LBX1P52954 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LBX1P52954 AC004522.1-201ENST00000419978 654 ntBASIC17.58■□□□□ 0.4
LBX1P52954 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LBX1P52954 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.58■□□□□ 0.4
LBX1P52954 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.58■□□□□ 0.4
LBX1P52954 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.58■□□□□ 0.4
LBX1P52954 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.58■□□□□ 0.4
LBX1P52954 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.58■□□□□ 0.4
LBX1P52954 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.58■□□□□ 0.4
LBX1P52954 AL132994.2-201ENST00000603120 687 ntBASIC17.58■□□□□ 0.4
LBX1P52954 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LBX1P52954 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.58■□□□□ 0.4
LBX1P52954 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LBX1P52954 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.58■□□□□ 0.4
LBX1P52954 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.58■□□□□ 0.4
LBX1P52954 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.57■□□□□ 0.4
LBX1P52954 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.57■□□□□ 0.4
LBX1P52954 AL136309.1-201ENST00000403917 691 ntBASIC17.57■□□□□ 0.4
LBX1P52954 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.57■□□□□ 0.4
LBX1P52954 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 RN7SL396P-201ENST00000471086 295 ntBASIC17.57■□□□□ 0.4
LBX1P52954 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.57■□□□□ 0.4
LBX1P52954 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.57■□□□□ 0.4
LBX1P52954 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LBX1P52954 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
LBX1P52954 AL450472.2-201ENST00000603663 1156 ntBASIC17.57■□□□□ 0.4
LBX1P52954 AC107464.3-201ENST00000609172 737 ntBASIC17.57■□□□□ 0.4
LBX1P52954 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.57■□□□□ 0.4
LBX1P52954 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LBX1P52954 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms