Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
EFNA3P52797 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
EFNA3P52797 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
EFNA3P52797 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
EFNA3P52797 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.9□□□□□ -0.02
EFNA3P52797 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
EFNA3P52797 AC025048.6-201ENST00000634326 1161 ntBASIC14.9□□□□□ -0.02
EFNA3P52797 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
EFNA3P52797 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
EFNA3P52797 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 AC098850.1-201ENST00000419919 790 ntBASIC14.89□□□□□ -0.03
EFNA3P52797 PHKG1P2-201ENST00000457537 863 ntBASIC14.89□□□□□ -0.03
EFNA3P52797 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.89□□□□□ -0.03
EFNA3P52797 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.89□□□□□ -0.03
EFNA3P52797 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
EFNA3P52797 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 AL607033.1-201ENST00000623900 1599 ntBASIC14.89□□□□□ -0.03
EFNA3P52797 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNA3P52797 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
EFNA3P52797 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 LINC02447-202ENST00000501888 2146 ntBASIC14.89□□□□□ -0.03
EFNA3P52797 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNA3P52797 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
EFNA3P52797 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EFNA3P52797 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 AC112504.1-201ENST00000623415 1841 ntBASIC14.88□□□□□ -0.03
EFNA3P52797 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms