Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.5■□□□□ 0.39
KRT9P35527 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT9P35527 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 AC040169.1-201ENST00000565382 521 ntBASIC17.5■□□□□ 0.39
KRT9P35527 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KRT9P35527 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.5■□□□□ 0.39
KRT9P35527 MIR4321-201ENST00000592276 80 ntBASIC17.5■□□□□ 0.39
KRT9P35527 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KRT9P35527 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT9P35527 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT9P35527 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT9P35527 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 AP001282.1-201ENST00000531301 1499 ntBASIC17.5■□□□□ 0.39
KRT9P35527 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT9P35527 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT9P35527 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
KRT9P35527 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
KRT9P35527 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT9P35527 POLD2P1-201ENST00000511220 997 ntBASIC17.49■□□□□ 0.39
KRT9P35527 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT9P35527 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT9P35527 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
KRT9P35527 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT9P35527 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT9P35527 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
KRT9P35527 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT9P35527 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT9P35527 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT9P35527 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.48■□□□□ 0.39
KRT9P35527 AC002347.1-201ENST00000569543 541 ntBASIC17.48■□□□□ 0.39
KRT9P35527 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
KRT9P35527 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT9P35527 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT9P35527 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT9P35527 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT9P35527 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms