Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.85■□□□□ 0.29
RFC1P35251 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFC1P35251 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RFC1P35251 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFC1P35251 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 CNN2P11-201ENST00000429351 262 ntBASIC16.84■□□□□ 0.29
RFC1P35251 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.84■□□□□ 0.29
RFC1P35251 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.84■□□□□ 0.29
RFC1P35251 AC023141.5-201ENST00000458585 616 ntBASIC16.84■□□□□ 0.29
RFC1P35251 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.84■□□□□ 0.29
RFC1P35251 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.84■□□□□ 0.29
RFC1P35251 AL596442.2-201ENST00000610240 980 ntBASIC16.84■□□□□ 0.29
RFC1P35251 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.84■□□□□ 0.29
RFC1P35251 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.84■□□□□ 0.29
RFC1P35251 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
RFC1P35251 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFC1P35251 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RFC1P35251 CYP4F24P-201ENST00000586049 1580 ntBASIC16.84■□□□□ 0.29
RFC1P35251 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.84■□□□□ 0.29
RFC1P35251 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
RFC1P35251 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFC1P35251 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFC1P35251 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RFC1P35251 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RFC1P35251 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFC1P35251 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFC1P35251 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.83■□□□□ 0.29
RFC1P35251 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFC1P35251 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFC1P35251 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFC1P35251 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RFC1P35251 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.83■□□□□ 0.28
RFC1P35251 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RFC1P35251 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RFC1P35251 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RFC1P35251 DNAJB3-202ENST00000449667 1266 ntBASIC16.83■□□□□ 0.28
RFC1P35251 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.83■□□□□ 0.28
RFC1P35251 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.83■□□□□ 0.28
RFC1P35251 BANF1P1-201ENST00000553684 263 ntBASIC16.83■□□□□ 0.28
RFC1P35251 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.83■□□□□ 0.28
RFC1P35251 AC027612.4-201ENST00000605371 583 ntBASIC16.83■□□□□ 0.28
RFC1P35251 REXO1L1P-202ENST00000608646 1974 ntBASIC16.83■□□□□ 0.28
RFC1P35251 AC023511.2-201ENST00000618803 211 ntBASIC16.83■□□□□ 0.28
RFC1P35251 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.83■□□□□ 0.28
RFC1P35251 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RFC1P35251 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFC1P35251 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RFC1P35251 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RFC1P35251 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RFC1P35251 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.82■□□□□ 0.28
RFC1P35251 CICP13-201ENST00000422015 2789 ntBASIC16.82■□□□□ 0.28
RFC1P35251 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.82■□□□□ 0.28
RFC1P35251 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.82■□□□□ 0.28
RFC1P35251 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms