Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KRT8P13-201ENST00000463294 1010 ntBASIC21.16■□□□□ 0.98
USP6P35125 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6P35125 RNA5SP486-201ENST00000515961 83 ntBASIC21.16■□□□□ 0.98
USP6P35125 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6P35125 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.16■□□□□ 0.98
USP6P35125 AC132938.4-201ENST00000623835 848 ntBASIC21.16■□□□□ 0.98
USP6P35125 AC068587.10-201ENST00000641210 219 ntBASIC21.16■□□□□ 0.98
USP6P35125 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.16■□□□□ 0.98
USP6P35125 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.16■□□□□ 0.98
USP6P35125 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
USP6P35125 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
USP6P35125 MIR1202-201ENST00000408529 83 ntBASIC21.15■□□□□ 0.98
USP6P35125 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.15■□□□□ 0.98
USP6P35125 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
USP6P35125 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.15■□□□□ 0.98
USP6P35125 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.15■□□□□ 0.98
USP6P35125 AL008638.5-201ENST00000623814 1298 ntBASIC21.15■□□□□ 0.98
USP6P35125 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 AC092364.2-201ENST00000596710 2692 ntBASIC21.15■□□□□ 0.98
USP6P35125 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.15■□□□□ 0.98
USP6P35125 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USP6P35125 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6P35125 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
USP6P35125 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.14■□□□□ 0.98
USP6P35125 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
USP6P35125 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP6P35125 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.14■□□□□ 0.98
USP6P35125 MTX1P1-201ENST00000440904 838 ntBASIC21.14■□□□□ 0.98
USP6P35125 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.14■□□□□ 0.98
USP6P35125 RPSAP36-202ENST00000494591 1261 ntBASIC21.14■□□□□ 0.98
USP6P35125 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
USP6P35125 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.14■□□□□ 0.98
USP6P35125 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.14■□□□□ 0.98
USP6P35125 EEF1DP1-201ENST00000585891 896 ntBASIC21.14■□□□□ 0.98
USP6P35125 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.14■□□□□ 0.98
USP6P35125 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.14■□□□□ 0.98
USP6P35125 PRSS30P-206ENST00000641773 873 ntBASIC21.14■□□□□ 0.98
USP6P35125 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6P35125 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6P35125 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.14■□□□□ 0.97
USP6P35125 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6P35125 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.14■□□□□ 0.97
USP6P35125 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.14■□□□□ 0.97
USP6P35125 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6P35125 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6P35125 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
USP6P35125 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
USP6P35125 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6P35125 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.13■□□□□ 0.97
USP6P35125 AC004945.1-201ENST00000416738 983 ntBASIC21.13■□□□□ 0.97
USP6P35125 CD8B2-202ENST00000417670 633 ntBASIC21.13■□□□□ 0.97
USP6P35125 CNN2P10-201ENST00000443067 918 ntBASIC21.13■□□□□ 0.97
USP6P35125 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.13■□□□□ 0.97
USP6P35125 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.13■□□□□ 0.97
USP6P35125 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms