Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.8□□□□□ -0.52
CKS2P33552 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.8□□□□□ -0.52
CKS2P33552 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 TMEM191A-211ENST00000637163 1067 ntBASIC11.8□□□□□ -0.52
CKS2P33552 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CKS2P33552 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CKS2P33552 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 C18orf15-201ENST00000623680 2534 ntBASIC11.79□□□□□ -0.52
CKS2P33552 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 RNF152P1-201ENST00000397754 604 ntBASIC11.79□□□□□ -0.52
CKS2P33552 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.79□□□□□ -0.52
CKS2P33552 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 AC087641.1-201ENST00000557561 1021 ntBASIC11.79□□□□□ -0.52
CKS2P33552 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.79□□□□□ -0.52
CKS2P33552 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 MROH4P-201ENST00000431302 1578 ntBASIC11.79□□□□□ -0.52
CKS2P33552 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CKS2P33552 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CKS2P33552 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CKS2P33552 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 AGAP7P-201ENST00000582299 2062 ntBASIC11.79□□□□□ -0.52
CKS2P33552 AGAP14-201ENST00000624701 2060 ntBASIC11.79□□□□□ -0.52
CKS2P33552 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS2P33552 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms