Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 CD8B2-202ENST00000417670 633 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC8P31273 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXC8P31273 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC8P31273 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC8P31273 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC8P31273 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC8P31273 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 AC023310.1-201ENST00000554836 735 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXC8P31273 AC025181.2-201ENST00000606994 802 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC8P31273 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HOXC8P31273 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 AC018695.7-201ENST00000624587 2492 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC8P31273 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC8P31273 AC092364.2-201ENST00000596710 2692 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.13■□□□□ 0.33
HOXC8P31273 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HOXC8P31273 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC8P31273 GOLGA2P4-201ENST00000441462 777 ntBASIC17.12■□□□□ 0.33
HOXC8P31273 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC8P31273 PFN1P12-201ENST00000455938 534 ntBASIC17.12■□□□□ 0.33
HOXC8P31273 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC8P31273 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC8P31273 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC8P31273 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 AC244093.1-201ENST00000610837 814 ntBASIC17.12■□□□□ 0.33
HOXC8P31273 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC8P31273 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC8P31273 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC8P31273 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC8P31273 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 RNU1-114P-201ENST00000365297 166 ntBASIC17.11■□□□□ 0.33
HOXC8P31273 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC8P31273 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 C2orf69P2-201ENST00000562032 1123 ntBASIC17.11■□□□□ 0.33
HOXC8P31273 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXC8P31273 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms