Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Z69890.1-201ENST00000382990 339 ntBASIC20.39■□□□□ 0.85
RXRBP28702 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.39■□□□□ 0.85
RXRBP28702 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.39■□□□□ 0.85
RXRBP28702 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.39■□□□□ 0.85
RXRBP28702 GHSR-202ENST00000427970 912 ntBASIC20.39■□□□□ 0.85
RXRBP28702 RPL8P2-201ENST00000430538 502 ntBASIC20.39■□□□□ 0.85
RXRBP28702 LYPLA2P1-203ENST00000447689 696 ntBASIC20.39■□□□□ 0.85
RXRBP28702 RPL18AP3-201ENST00000462885 528 ntBASIC20.39■□□□□ 0.85
RXRBP28702 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RXRBP28702 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 AC026803.1-201ENST00000569130 274 ntBASIC20.39■□□□□ 0.85
RXRBP28702 AC005632.3-201ENST00000605544 308 ntBASIC20.39■□□□□ 0.85
RXRBP28702 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.39■□□□□ 0.85
RXRBP28702 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RXRBP28702 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RXRBP28702 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.39■□□□□ 0.85
RXRBP28702 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 BAK1P1-201ENST00000317045 636 ntBASIC20.38■□□□□ 0.85
RXRBP28702 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.38■□□□□ 0.85
RXRBP28702 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 AC027139.1-201ENST00000565286 951 ntBASIC20.38■□□□□ 0.85
RXRBP28702 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.38■□□□□ 0.85
RXRBP28702 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 AC006158.1-201ENST00000610661 249 ntBASIC20.38■□□□□ 0.85
RXRBP28702 AC092299.1-201ENST00000632679 757 ntBASIC20.38■□□□□ 0.85
RXRBP28702 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
RXRBP28702 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.38■□□□□ 0.85
RXRBP28702 AC087289.5-201ENST00000586076 3175 ntBASIC20.38■□□□□ 0.85
RXRBP28702 AL138688.1-201ENST00000624851 1594 ntBASIC20.38■□□□□ 0.85
RXRBP28702 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RXRBP28702 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RXRBP28702 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RXRBP28702 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RXRBP28702 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.37■□□□□ 0.85
RXRBP28702 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.37■□□□□ 0.85
RXRBP28702 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.37■□□□□ 0.85
RXRBP28702 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC20.37■□□□□ 0.85
RXRBP28702 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RXRBP28702 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.37■□□□□ 0.85
RXRBP28702 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.37■□□□□ 0.85
RXRBP28702 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RXRBP28702 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.37■□□□□ 0.85
RXRBP28702 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RXRBP28702 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RXRBP28702 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.36■□□□□ 0.85
RXRBP28702 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 AC009053.2-201ENST00000563701 2365 ntBASIC20.36■□□□□ 0.85
RXRBP28702 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 UROS-201ENST00000368774 744 ntTSL 2 BASIC20.36■□□□□ 0.85
RXRBP28702 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.36■□□□□ 0.85
RXRBP28702 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.36■□□□□ 0.85
RXRBP28702 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RXRBP28702 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.36■□□□□ 0.85
RXRBP28702 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.36■□□□□ 0.85
RXRBP28702 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.36■□□□□ 0.85
RXRBP28702 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC20.36■□□□□ 0.85
RXRBP28702 AC106820.3-201ENST00000561653 397 ntBASIC20.36■□□□□ 0.85
RXRBP28702 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms