Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 AC005622.1-201ENST00000636801 1703 ntBASIC14.97□□□□□ -0.01
CHMP24386 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP24386 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP24386 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHMP24386 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CHMP24386 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHMP24386 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.97□□□□□ -0.01
CHMP24386 IGHV3-62-201ENST00000520057 340 ntBASIC14.97□□□□□ -0.01
CHMP24386 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
CHMP24386 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CHMP24386 AC008267.7-201ENST00000624570 1194 ntBASIC14.97□□□□□ -0.01
CHMP24386 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.97□□□□□ -0.01
CHMP24386 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP24386 AC023157.3-201ENST00000619086 2088 ntBASIC14.97□□□□□ -0.01
CHMP24386 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP24386 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP24386 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.96□□□□□ -0.01
CHMP24386 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
CHMP24386 AL627223.1-201ENST00000416693 442 ntBASIC14.96□□□□□ -0.01
CHMP24386 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 AC005237.2-201ENST00000434368 219 ntBASIC14.96□□□□□ -0.01
CHMP24386 SPCS2P4-201ENST00000436160 681 ntBASIC14.96□□□□□ -0.01
CHMP24386 METTL21AP1-201ENST00000438852 635 ntBASIC14.96□□□□□ -0.01
CHMP24386 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 AC023141.5-201ENST00000458585 616 ntBASIC14.96□□□□□ -0.01
CHMP24386 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP24386 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP24386 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP24386 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.96□□□□□ -0.01
CHMP24386 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.96□□□□□ -0.01
CHMP24386 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
CHMP24386 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHMP24386 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHMP24386 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP24386 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP24386 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP24386 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP24386 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP24386 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
CHMP24386 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
CHMP24386 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP24386 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 FAM45BP-202ENST00000592932 1624 ntBASIC14.95□□□□□ -0.02
CHMP24386 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHMP24386 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CHMP24386 AC136621.1-201ENST00000624017 2304 ntBASIC14.95□□□□□ -0.02
CHMP24386 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHMP24386 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP24386 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms