Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP8P22894 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP8P22894 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
MMP8P22894 AL136317.3-201ENST00000618497 906 ntBASIC16.73■□□□□ 0.27
MMP8P22894 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP8P22894 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MMP8P22894 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP8P22894 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MMP8P22894 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 HYMAI-201ENST00000635591 3347 ntBASIC16.73■□□□□ 0.27
MMP8P22894 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.73■□□□□ 0.27
MMP8P22894 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 RPL37AP1-201ENST00000412502 279 ntBASIC16.72■□□□□ 0.27
MMP8P22894 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP8P22894 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP8P22894 HLA-V-204ENST00000476601 1289 ntBASIC16.72■□□□□ 0.27
MMP8P22894 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP8P22894 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.72■□□□□ 0.27
MMP8P22894 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.72■□□□□ 0.27
MMP8P22894 AC025678.2-201ENST00000562061 970 ntBASIC16.72■□□□□ 0.27
MMP8P22894 AC139530.3-201ENST00000620344 690 ntBASIC16.72■□□□□ 0.27
MMP8P22894 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP8P22894 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP8P22894 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP8P22894 TUBB3P1-201ENST00000405796 1332 ntBASIC16.71■□□□□ 0.27
MMP8P22894 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP8P22894 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
MMP8P22894 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MMP8P22894 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP8P22894 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 AC051619.7-201ENST00000568314 623 ntBASIC16.71■□□□□ 0.27
MMP8P22894 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
MMP8P22894 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP8P22894 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP8P22894 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP8P22894 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
MMP8P22894 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP8P22894 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP8P22894 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
MMP8P22894 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms