Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
XRCC1P18887 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
XRCC1P18887 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
XRCC1P18887 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
XRCC1P18887 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
XRCC1P18887 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
XRCC1P18887 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 PCGF3-213ENST00000620529 1899 ntBASIC15.95■□□□□ 0.14
XRCC1P18887 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
XRCC1P18887 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 LINC01144-201ENST00000626198 1710 ntBASIC15.95■□□□□ 0.14
XRCC1P18887 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.95■□□□□ 0.14
XRCC1P18887 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
XRCC1P18887 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.95■□□□□ 0.14
XRCC1P18887 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.95■□□□□ 0.14
XRCC1P18887 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.95■□□□□ 0.14
XRCC1P18887 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.95■□□□□ 0.14
XRCC1P18887 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 AC007967.4-201ENST00000614700 386 ntBASIC15.95■□□□□ 0.14
XRCC1P18887 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.95■□□□□ 0.14
XRCC1P18887 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
XRCC1P18887 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
XRCC1P18887 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
XRCC1P18887 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XRCC1P18887 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.94■□□□□ 0.14
XRCC1P18887 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 MIR943-201ENST00000401286 94 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.94■□□□□ 0.14
XRCC1P18887 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.94■□□□□ 0.14
XRCC1P18887 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 AC011467.4-201ENST00000594891 528 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 AL390955.2-201ENST00000603032 514 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 AL158211.3-201ENST00000607385 239 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 AC003101.2-201ENST00000612557 442 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 AC006058.4-201ENST00000624016 1670 ntBASIC15.94■□□□□ 0.14
XRCC1P18887 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
XRCC1P18887 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XRCC1P18887 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
XRCC1P18887 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms