Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRAFP15056 AL353732.1-201ENST00000569618 1459 ntBASIC16.48■□□□□ 0.23
BRAFP15056 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRAFP15056 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BRAFP15056 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
BRAFP15056 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 AC138035.3-201ENST00000622706 2791 ntBASIC16.47■□□□□ 0.23
BRAFP15056 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BRAFP15056 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BRAFP15056 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.47■□□□□ 0.23
BRAFP15056 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 FAM58CP-201ENST00000435741 640 ntBASIC16.47■□□□□ 0.23
BRAFP15056 MKNK2P1-201ENST00000437526 628 ntBASIC16.47■□□□□ 0.23
BRAFP15056 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.47■□□□□ 0.23
BRAFP15056 AL031432.2-201ENST00000566714 459 ntBASIC16.47■□□□□ 0.23
BRAFP15056 AL928711.1-201ENST00000570165 459 ntBASIC16.47■□□□□ 0.23
BRAFP15056 MIR4469-201ENST00000583919 79 ntBASIC16.47■□□□□ 0.23
BRAFP15056 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.47■□□□□ 0.23
BRAFP15056 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 AC091812.2-201ENST00000619081 385 ntBASIC16.47■□□□□ 0.23
BRAFP15056 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BRAFP15056 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 AC005622.1-201ENST00000636801 1703 ntBASIC16.47■□□□□ 0.23
BRAFP15056 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.47■□□□□ 0.23
BRAFP15056 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
BRAFP15056 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRAFP15056 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BRAFP15056 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.46■□□□□ 0.23
BRAFP15056 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
BRAFP15056 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.46■□□□□ 0.23
BRAFP15056 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.46■□□□□ 0.23
BRAFP15056 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
BRAFP15056 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 AL691403.2-201ENST00000618460 490 ntBASIC16.46■□□□□ 0.23
BRAFP15056 AC134684.3-201ENST00000641758 218 ntBASIC16.46■□□□□ 0.23
BRAFP15056 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.46■□□□□ 0.23
BRAFP15056 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
BRAFP15056 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.46■□□□□ 0.23
BRAFP15056 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRAFP15056 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BRAFP15056 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
BRAFP15056 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
BRAFP15056 AC012569.1-201ENST00000591191 1524 ntBASIC16.45■□□□□ 0.22
BRAFP15056 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.45■□□□□ 0.22
BRAFP15056 CICP13-201ENST00000422015 2789 ntBASIC16.45■□□□□ 0.22
BRAFP15056 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRAFP15056 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.45■□□□□ 0.22
BRAFP15056 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
BRAFP15056 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.45■□□□□ 0.22
BRAFP15056 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BRAFP15056 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms