Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.73□□□□□ -0.05
BMP4P12644 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 PTCHD3P3-201ENST00000403073 906 ntBASIC14.73□□□□□ -0.05
BMP4P12644 MCCD1P2-201ENST00000423228 335 ntBASIC14.73□□□□□ -0.05
BMP4P12644 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.73□□□□□ -0.05
BMP4P12644 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.73□□□□□ -0.05
BMP4P12644 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
BMP4P12644 AC005829.1-201ENST00000570002 483 ntBASIC14.73□□□□□ -0.05
BMP4P12644 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.73□□□□□ -0.05
BMP4P12644 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.73□□□□□ -0.05
BMP4P12644 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.73□□□□□ -0.05
BMP4P12644 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 AC041040.2-201ENST00000622926 2899 ntBASIC14.73□□□□□ -0.05
BMP4P12644 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
BMP4P12644 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
BMP4P12644 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BMP4P12644 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 AC232323.1-201ENST00000540724 2099 ntBASIC14.72□□□□□ -0.05
BMP4P12644 REXO1L5P-201ENST00000622260 2098 ntBASIC14.72□□□□□ -0.05
BMP4P12644 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 REXO1L8P-201ENST00000604378 1897 ntBASIC14.72□□□□□ -0.05
BMP4P12644 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
BMP4P12644 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 AC023274.1-201ENST00000418278 595 ntBASIC14.72□□□□□ -0.05
BMP4P12644 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.72□□□□□ -0.05
BMP4P12644 AC004967.1-201ENST00000453589 447 ntBASIC14.72□□□□□ -0.05
BMP4P12644 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
BMP4P12644 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.72□□□□□ -0.05
BMP4P12644 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 AL671710.1-201ENST00000610245 2349 ntBASIC14.72□□□□□ -0.05
BMP4P12644 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.72□□□□□ -0.05
BMP4P12644 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BMP4P12644 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BMP4P12644 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BMP4P12644 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BMP4P12644 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BMP4P12644 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BMP4P12644 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms