Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
KRT3P12035 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT3P12035 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 AC105021.1-202ENST00000570572 669 ntBASIC16.83■□□□□ 0.28
KRT3P12035 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT3P12035 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT3P12035 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.83■□□□□ 0.28
KRT3P12035 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT3P12035 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
KRT3P12035 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT3P12035 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT3P12035 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT3P12035 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
KRT3P12035 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
KRT3P12035 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT3P12035 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT3P12035 KRT8P37-201ENST00000451609 1420 ntBASIC16.82■□□□□ 0.28
KRT3P12035 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 MIR1233-2-201ENST00000408138 82 ntBASIC16.82■□□□□ 0.28
KRT3P12035 MIR1233-1-201ENST00000408722 82 ntBASIC16.82■□□□□ 0.28
KRT3P12035 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 DNAJB3-202ENST00000449667 1266 ntBASIC16.82■□□□□ 0.28
KRT3P12035 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT3P12035 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT3P12035 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.82■□□□□ 0.28
KRT3P12035 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT3P12035 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT3P12035 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT3P12035 CICP13-201ENST00000422015 2789 ntBASIC16.81■□□□□ 0.28
KRT3P12035 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT3P12035 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.81■□□□□ 0.28
KRT3P12035 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.81■□□□□ 0.28
KRT3P12035 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 BANF1P1-201ENST00000553684 263 ntBASIC16.81■□□□□ 0.28
KRT3P12035 AC023511.2-201ENST00000618803 211 ntBASIC16.81■□□□□ 0.28
KRT3P12035 AP001059.3-201ENST00000619053 235 ntBASIC16.81■□□□□ 0.28
KRT3P12035 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT3P12035 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT3P12035 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
KRT3P12035 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT3P12035 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT3P12035 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT3P12035 AC027612.4-201ENST00000605371 583 ntBASIC16.8■□□□□ 0.28
KRT3P12035 AC007967.4-201ENST00000614700 386 ntBASIC16.8■□□□□ 0.28
KRT3P12035 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms