Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 GPX1P2-201ENST00000429271 606 ntBASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC245100.5-201ENST00000452108 331 ntBASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC073389.1-201ENST00000595595 795 ntBASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC026120.1-201ENST00000611536 926 ntBASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC008267.7-201ENST00000624570 1194 ntBASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 MCCD1P2-201ENST00000423228 335 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 RN7SL589P-201ENST00000481268 310 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AC098859.1-201ENST00000502915 1238 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 IGHV3-62-201ENST00000520057 340 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 FAM86C2P-203ENST00000528684 1004 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AC243562.1-201ENST00000560672 389 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AL671883.3-201ENST00000603274 991 ntBASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV3-43DP0DP04 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms