Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
HOXC6P09630 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.85■□□□□ 0.45
HOXC6P09630 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
HOXC6P09630 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXC6P09630 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.85■□□□□ 0.45
HOXC6P09630 AC006033.1-201ENST00000440505 426 ntBASIC17.85■□□□□ 0.45
HOXC6P09630 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXC6P09630 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXC6P09630 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HOXC6P09630 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 AC025279.2-201ENST00000569730 653 ntBASIC17.85■□□□□ 0.45
HOXC6P09630 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXC6P09630 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.85■□□□□ 0.45
HOXC6P09630 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 AC243960.2-201ENST00000600996 747 ntBASIC17.85■□□□□ 0.45
HOXC6P09630 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXC6P09630 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.85■□□□□ 0.45
HOXC6P09630 AC134407.2-201ENST00000625089 1978 ntBASIC17.85■□□□□ 0.45
HOXC6P09630 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXC6P09630 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXC6P09630 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXC6P09630 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC6P09630 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC6P09630 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC6P09630 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC6P09630 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HOXC6P09630 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HOXC6P09630 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HOXC6P09630 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 AC006001.1-201ENST00000325130 474 ntBASIC17.84■□□□□ 0.45
HOXC6P09630 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC6P09630 AC023310.1-201ENST00000554836 735 ntBASIC17.84■□□□□ 0.45
HOXC6P09630 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.84■□□□□ 0.45
HOXC6P09630 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.84■□□□□ 0.45
HOXC6P09630 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC6P09630 AC091271.1-201ENST00000611877 1162 ntBASIC17.84■□□□□ 0.45
HOXC6P09630 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.84■□□□□ 0.45
HOXC6P09630 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HOXC6P09630 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC6P09630 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC6P09630 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HOXC6P09630 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC6P09630 AL607033.1-201ENST00000623900 1599 ntBASIC17.83■□□□□ 0.45
HOXC6P09630 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC6P09630 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.83■□□□□ 0.45
HOXC6P09630 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC6P09630 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC6P09630 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC6P09630 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.83■□□□□ 0.45
HOXC6P09630 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HOXC6P09630 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HOXC6P09630 ALOX12P2-203ENST00000570921 1945 ntBASIC17.83■□□□□ 0.44
HOXC6P09630 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HOXC6P09630 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HOXC6P09630 AC004945.1-201ENST00000416738 983 ntBASIC17.83■□□□□ 0.44
HOXC6P09630 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC6P09630 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC6P09630 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC6P09630 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC6P09630 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms