Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 AC108725.1-201ENST00000495472 409 ntBASIC16.07■□□□□ 0.16
RETP07949 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.07■□□□□ 0.16
RETP07949 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.07■□□□□ 0.16
RETP07949 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.07■□□□□ 0.16
RETP07949 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.07■□□□□ 0.16
RETP07949 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.07■□□□□ 0.16
RETP07949 AC074044.1-201ENST00000609673 707 ntBASIC16.07■□□□□ 0.16
RETP07949 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RETP07949 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.07■□□□□ 0.16
RETP07949 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.07■□□□□ 0.16
RETP07949 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RETP07949 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 AC007950.2-201ENST00000615045 2347 ntBASIC16.07■□□□□ 0.16
RETP07949 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RETP07949 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.06■□□□□ 0.16
RETP07949 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RETP07949 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.06■□□□□ 0.16
RETP07949 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.06■□□□□ 0.16
RETP07949 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.06■□□□□ 0.16
RETP07949 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RETP07949 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.06■□□□□ 0.16
RETP07949 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.06■□□□□ 0.16
RETP07949 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.06■□□□□ 0.16
RETP07949 MIR3615-201ENST00000581999 87 ntBASIC16.06■□□□□ 0.16
RETP07949 RN7SL190P-201ENST00000582519 257 ntBASIC16.06■□□□□ 0.16
RETP07949 RPSAP52-203ENST00000622976 1023 ntBASIC16.06■□□□□ 0.16
RETP07949 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RETP07949 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RETP07949 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RETP07949 AC008741.2-201ENST00000612792 3115 ntBASIC16.05■□□□□ 0.16
RETP07949 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.05■□□□□ 0.16
RETP07949 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RETP07949 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RETP07949 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RETP07949 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 AL645728.1-201ENST00000366221 2101 ntBASIC16.05■□□□□ 0.16
RETP07949 AL162726.2-201ENST00000438986 1017 ntBASIC16.05■□□□□ 0.16
RETP07949 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.05■□□□□ 0.16
RETP07949 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.05■□□□□ 0.16
RETP07949 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.05■□□□□ 0.16
RETP07949 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.05■□□□□ 0.16
RETP07949 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.05■□□□□ 0.16
RETP07949 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.05■□□□□ 0.16
RETP07949 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.05■□□□□ 0.16
RETP07949 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RETP07949 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RETP07949 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 AL391256.1-201ENST00000443260 1855 ntBASIC16.05■□□□□ 0.16
RETP07949 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms