Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APOA4P06727 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.03■□□□□ 0.16
APOA4P06727 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 LINC01225-203ENST00000563550 1244 ntBASIC16.03■□□□□ 0.16
APOA4P06727 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.03■□□□□ 0.16
APOA4P06727 AP000842.3-202ENST00000569238 1080 ntBASIC16.03■□□□□ 0.16
APOA4P06727 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 AC024267.1-201ENST00000582320 895 ntBASIC16.03■□□□□ 0.16
APOA4P06727 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.03■□□□□ 0.16
APOA4P06727 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.03■□□□□ 0.16
APOA4P06727 AL513210.1-201ENST00000629608 234 ntBASIC16.03■□□□□ 0.16
APOA4P06727 AC099063.4-201ENST00000641099 1602 ntBASIC16.03■□□□□ 0.16
APOA4P06727 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.03■□□□□ 0.16
APOA4P06727 AP001282.1-201ENST00000531301 1499 ntBASIC16.03■□□□□ 0.16
APOA4P06727 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOA4P06727 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 DBET-201ENST00000630918 3363 ntBASIC16.02■□□□□ 0.16
APOA4P06727 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 MIR346-201ENST00000362234 95 ntBASIC16.02■□□□□ 0.16
APOA4P06727 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 MIR1233-2-201ENST00000408138 82 ntBASIC16.02■□□□□ 0.16
APOA4P06727 MIR1233-1-201ENST00000408722 82 ntBASIC16.02■□□□□ 0.16
APOA4P06727 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 AC142381.1-201ENST00000426099 345 ntBASIC16.02■□□□□ 0.16
APOA4P06727 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.02■□□□□ 0.16
APOA4P06727 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 AC069335.1-201ENST00000489972 472 ntBASIC16.02■□□□□ 0.16
APOA4P06727 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.02■□□□□ 0.16
APOA4P06727 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.02■□□□□ 0.16
APOA4P06727 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.02■□□□□ 0.16
APOA4P06727 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.02■□□□□ 0.16
APOA4P06727 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOA4P06727 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.02■□□□□ 0.16
APOA4P06727 AC023511.2-201ENST00000618803 211 ntBASIC16.02■□□□□ 0.16
APOA4P06727 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
APOA4P06727 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
APOA4P06727 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.02■□□□□ 0.15
APOA4P06727 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
APOA4P06727 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APOA4P06727 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.02■□□□□ 0.15
APOA4P06727 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
APOA4P06727 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOA4P06727 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APOA4P06727 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms