Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RB1P06400 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RB1P06400 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RB1P06400 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
RB1P06400 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RB1P06400 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RB1P06400 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.71■□□□□ 0.27
RB1P06400 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RB1P06400 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 AL133267.1-201ENST00000398220 340 ntBASIC16.71■□□□□ 0.27
RB1P06400 CD8B2-202ENST00000417670 633 ntBASIC16.71■□□□□ 0.27
RB1P06400 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.71■□□□□ 0.27
RB1P06400 IGHJ2P-201ENST00000454480 60 ntBASIC16.71■□□□□ 0.27
RB1P06400 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.71■□□□□ 0.27
RB1P06400 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.71■□□□□ 0.27
RB1P06400 AC105020.1-201ENST00000435356 2205 ntBASIC16.71■□□□□ 0.27
RB1P06400 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RB1P06400 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.71■□□□□ 0.26
RB1P06400 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RB1P06400 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RB1P06400 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 AC007969.1-201ENST00000433675 447 ntBASIC16.7■□□□□ 0.26
RB1P06400 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 AC091804.1-201ENST00000486888 567 ntBASIC16.7■□□□□ 0.26
RB1P06400 SCARNA20.5-201ENST00000516991 142 ntBASIC16.7■□□□□ 0.26
RB1P06400 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RB1P06400 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 AC145423.3-201ENST00000615987 467 ntBASIC16.7■□□□□ 0.26
RB1P06400 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.7■□□□□ 0.26
RB1P06400 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.7■□□□□ 0.26
RB1P06400 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RB1P06400 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RB1P06400 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RB1P06400 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RB1P06400 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 HOMER2P2-201ENST00000451621 847 ntBASIC16.69■□□□□ 0.26
RB1P06400 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms