Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR3DP05423 SRD5A3P1-201ENST00000603021 949 ntBASIC19.05■□□□□ 0.64
POLR3DP05423 AC012645.4-201ENST00000610691 1061 ntBASIC19.05■□□□□ 0.64
POLR3DP05423 AC004790.1-201ENST00000612686 536 ntBASIC19.05■□□□□ 0.64
POLR3DP05423 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.05■□□□□ 0.64
POLR3DP05423 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.05■□□□□ 0.64
POLR3DP05423 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR3DP05423 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.05■□□□□ 0.64
POLR3DP05423 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR3DP05423 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
POLR3DP05423 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
POLR3DP05423 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR3DP05423 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.05■□□□□ 0.64
POLR3DP05423 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR3DP05423 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
POLR3DP05423 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR3DP05423 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.04■□□□□ 0.64
POLR3DP05423 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR3DP05423 HAUS4P1-201ENST00000406739 1145 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 KRT8P37-201ENST00000451609 1420 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
POLR3DP05423 API5-211ENST00000534695 560 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 BNIP3P1-202ENST00000550043 1585 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.04■□□□□ 0.64
POLR3DP05423 AC025048.3-201ENST00000590609 569 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.04■□□□□ 0.64
POLR3DP05423 AC005702.4-201ENST00000618393 416 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 AL035252.4-201ENST00000624174 288 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR3DP05423 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR3DP05423 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 AC006449.6-201ENST00000612330 2296 ntBASIC19.04■□□□□ 0.64
POLR3DP05423 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR3DP05423 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.03■□□□□ 0.64
POLR3DP05423 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.03■□□□□ 0.64
POLR3DP05423 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.03■□□□□ 0.64
POLR3DP05423 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 DFFBP1-201ENST00000433250 979 ntBASIC19.03■□□□□ 0.64
POLR3DP05423 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.03■□□□□ 0.64
POLR3DP05423 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.03■□□□□ 0.64
POLR3DP05423 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.03■□□□□ 0.64
POLR3DP05423 AL358472.5-202ENST00000641448 1267 ntBASIC19.03■□□□□ 0.64
POLR3DP05423 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
POLR3DP05423 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
POLR3DP05423 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR3DP05423 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms